EnhancerDB
  1. Home
  2. SNP
  3. rs62401198[chr6:43801654]
Enhancers that have rs62401198[chr6:43801654]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43752825 43813215 enh23254
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs62401198[chr6:43801654]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43801640 43801655 HNF1A JASPAR yes 101791056
chr6 43801641 43801654 HNF1B JASPAR yes 101791057
chr6 43801642 43801654 HNF1B JASPAR yes 101791058
chr6 43801644 43801654 EMX1 JASPAR yes 101791059
chr6 43801644 43801654 EVX1 JASPAR yes 101791060
chr6 43801644 43801654 EVX2 JASPAR yes 101791061
chr6 43801644 43801654 HOXA2 JASPAR yes 101791062
chr6 43801644 43801654 MEOX1 JASPAR yes 101791063
chr6 43801644 43801654 MEOX2 JASPAR yes 101791064
chr6 43801650 43801664 EBF1 JASPAR yes 101791065
chr6 43801652 43801663 EBF1 JASPAR yes 101791066
Genes associated with rs62401198[chr6:43801654], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 42952237 42980080 + PPP2R5D ENSG00000112640.10 42952237 821574 Ovary 0.145354 6598