EnhancerDB
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  3. rs62415941[chr6:42101486]
Enhancers that have rs62415941[chr6:42101486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42097349 42109195 enh9110
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Brain (SK-N-MC) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs62415941[chr6:42101486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42101478 42101493 MEF2A JASPAR yes 101694822
chr6 42101479 42101494 MEF2C JASPAR yes 101694823
chr6 42101481 42101491 MEF2A JASPAR yes 101694824
chr6 42101482 42101486 YY1 TRANSFAC yes 101694825
chr6 42101482 42101492 HOXC10 JASPAR yes 101694826
chr6 42101482 42101492 HOXD11 JASPAR yes 101694827
chr6 42101482 42101493 HOXA10 JASPAR yes 101694828
chr6 42101482 42101493 HOXC11 JASPAR yes 101694829
chr6 42101483 42101492 CDX1 JASPAR yes 101694830
Genes associated with rs62415941[chr6:42101486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 42749765 42836298 + GLTSCR1L ENSG00000112624.8 42749765 648279 Ovary 0.820362 6591