EnhancerDB
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  3. rs639559[chr1:42425496]
Enhancers that have rs639559[chr1:42425496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42414541 42425761 enh26655
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs639559[chr1:42425496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42425493 42425508 MEF2A JASPAR yes 28442319
chr1 42425494 42425506 MEF2A JASPAR yes 28442320
chr1 42425494 42425506 MEF2B JASPAR yes 28442321
chr1 42425494 42425506 MEF2D JASPAR yes 28442322
chr1 42425495 42425505 MEF2A JASPAR yes 28442323
Genes associated with rs639559[chr1:42425496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More