EnhancerDB
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  3. rs6421403[chr1:17241334]
Enhancers that have rs6421403[chr1:17241334]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs6421403[chr1:17241334]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17241317 17241334 ESR1 JASPAR yes 27065188
chr1 17241326 17241340 EBF1 JASPAR yes 27065190
chr1 17241327 17241338 EBF1 JASPAR yes 27065191
chr1 17241328 17241339 EBF1 JASPAR yes 27065192
chr1 17241334 17241339 ETS2 TRANSFAC yes 27065193
Genes associated with rs6421403[chr1:17241334], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More