EnhancerDB
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  3. rs6427827[chr1:200398387]
Enhancers that have rs6427827[chr1:200398387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs6427827[chr1:200398387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200397423 200403660 AR GTRD no Prostate (PC-3) 21363463
chr1 200397423 200403660 AR GTRD no Prostate (PC-3) 107855280
chr1 200398378 200398391 ZBTB18 JASPAR yes 34445892
chr1 200398380 200398390 FIGLA JASPAR yes 34445893
chr1 200398380 200398390 ID4 JASPAR yes 34445894
chr1 200398380 200398390 TCF3 JASPAR yes 34445895
chr1 200398380 200398390 TCF4 JASPAR yes 34445896
Genes associated with rs6427827[chr1:200398387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More