EnhancerDB
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  3. rs6428891[chr1:116873176]
Enhancers that have rs6428891[chr1:116873176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6428891[chr1:116873176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116872710 116873214 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332183
chr1 116873151 116873549 ZNF274 GTRD no Bone Marrow (K562) 21332185
chr1 116873175 116873196 REST JASPAR yes 31795910
chr1 116873176 116873183 NKX3-1 JASPAR yes 31795911
Genes associated with rs6428891[chr1:116873176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More