EnhancerDB
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  3. rs6429339[chr1:242375779]
Enhancers that have rs6429339[chr1:242375779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 242367225 242377155 enh67362
Breast Prostate (PC-3) Neural Stem Cells (H9)
chr1 242375774 242375872 vista5840
VISTA
Transcript factors that have rs6429339[chr1:242375779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 242375670 242376046 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107887706
chr1 242375767 242376017 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107887707
chr1 242375772 242375784 TAL1 JASPAR yes 36642381
chr1 242375772 242375784 TAL1 JASPAR yes 118495480
chr1 242375774 242375784 NEUROG2 JASPAR yes 36642382
chr1 242375774 242375784 NEUROG2 JASPAR yes 118495481
chr1 242375777 242376047 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107887708
Genes associated with rs6429339[chr1:242375779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More