EnhancerDB
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  3. rs6481518[chr10:28667065]
Enhancers that have rs6481518[chr10:28667065]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 28652705 28673755 enh13080
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs6481518[chr10:28667065]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 28666572 28667632 ZNF143 GTRD no Epithelial (MCF-7) 21423016
chr10 28666582 28667458 ZNF143 GTRD no Epithelial (MCF-7) 21423017
chr10 28666608 28667253 ZNF143 GTRD no Epithelial (MCF-7) 21423018
chr10 28666614 28667566 ZNF143 GTRD no Epithelial (MCF-7) 21423019
chr10 28666616 28667530 ZNF143 GTRD no Epithelial (MCF-7) 21423020
chr10 28666703 28667310 ZNF274 GTRD no Liver (HepG2) 21423021
chr10 28666711 28667169 ZNF274 GTRD no Liver (HepG2) 21423022
chr10 28666715 28667132 ZNF143 GTRD no Epithelial (MCF-7) 21423023
chr10 28666784 28667141 ZNF274 GTRD no Liver (HepG2) 21423024
chr10 28666856 28667192 ZNF143 GTRD no Epithelial (MCF-7) 21423025
chr10 28667055 28667070 FOXP1 JASPAR yes 126227860
chr10 28667057 28667072 FOXP1 JASPAR yes 126227861
chr10 28667063 28667073 NFAT4 TRANSFAC yes 126227862
chr10 28667064 28667068 YY1 TRANSFAC yes 126227863
Genes associated with rs6481518[chr10:28667065], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More