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- rs6504662[chr17:48580257]
Enhancers that have rs6504662[chr17:48580257]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
48569165 |
48580715 |
enh86256 |
|
|
Transcript factors that have rs6504662[chr17:48580257]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
48578592
|
48581062
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21769823
|
|
|
chr17
|
48580170
|
48580968
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21769824
|
|
|
chr17
|
48580251
|
48580266
|
RFX5
|
JASPAR
|
yes
|
|
54706661
|
|
|
chr17
|
48580253
|
48580268
|
RUNX2
|
JASPAR
|
yes
|
|
54706662
|
|
|
chr17
|
48580257
|
48580267
|
RUNX3
|
JASPAR
|
yes
|
|
54706663
|
|
Genes associated with rs6504662[chr17:48580257], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
48585745
|
48608862
|
+
|
MYCBPAP
|
ENSG00000136449.9
|
48585745
|
5488
|
Breast
|
1.45752e-12
|
16038
|
|
|
chr17
|
48585745
|
48608862
|
+
|
MYCBPAP
|
ENSG00000136449.9
|
48585745
|
5488
|
Spleen
|
4.26446e-09
|
16038
|
|