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- rs6537886[chr1:110478860]
Enhancers that have rs6537886[chr1:110478860]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
110471785 |
110480315 |
enh27064 |
|
|
Transcript factors that have rs6537886[chr1:110478860]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
110476502
|
110479165
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107820741
|
|
|
chr1
|
110478840
|
110478860
|
RREB1
|
JASPAR
|
yes
|
|
31453365
|
|
|
chr1
|
110478843
|
110478863
|
RREB1
|
JASPAR
|
yes
|
|
31453366
|
|
|
chr1
|
110478858
|
110478869
|
NFE2
|
JASPAR
|
yes
|
|
31453367
|
|
Genes associated with rs6537886[chr1:110478860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
110009180
|
110024759
|
+
|
SYPL2
|
ENSG00000143028.7
|
110009180
|
454101
|
Spleen
|
0.375198
|
977
|
|