EnhancerDB
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  3. rs6539448[chr12:109013781]
Enhancers that have rs6539448[chr12:109013781]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6539448[chr12:109013781]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109013359 109013929 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21571066
chr12 109013518 109014174 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21571067
chr12 109013780 109013785 GATA1 TRANSFAC yes 123607688
Genes associated with rs6539448[chr12:109013781], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More