EnhancerDB
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  3. rs6540144[chr16:88047231]
Enhancers that have rs6540144[chr16:88047231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88040585 88061035 enh4183
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Stomach
Transcript factors that have rs6540144[chr16:88047231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88047226 88047241 HNF4A JASPAR yes 12256357
chr16 88047227 88047242 HNF4G JASPAR yes 12256358
chr16 88047231 88047237 SOX10 JASPAR yes 12256359
Genes associated with rs6540144[chr16:88047231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More