EnhancerDB
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  3. rs6540154[chr16:88053729]
Enhancers that have rs6540154[chr16:88053729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88040585 88061035 enh4183
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Stomach
Transcript factors that have rs6540154[chr16:88053729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88053715 88053729 RORA JASPAR yes 12257147
chr16 88053720 88053738 ESR1 JASPAR yes 12257149
chr16 88053729 88053744 LEF1 JASPAR yes 12257151
Genes associated with rs6540154[chr16:88053729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More