EnhancerDB
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  3. rs6540549[chr1:209922668]
Enhancers that have rs6540549[chr1:209922668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209912645 209924275 enh12622
Bone Marrow (K562) Prostate (PC-3) Large Intestine Ovary Blood (T-cell) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Pancreas Pancreas (Panc1) Thymus Heart
Transcript factors that have rs6540549[chr1:209922668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209922655 209922669 POU1F1 JASPAR yes 34994757
chr1 209922656 209922669 POU3F3 JASPAR yes 34994758
chr1 209922663 209922677 TCF7L2 JASPAR yes 34994759
Genes associated with rs6540549[chr1:209922668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More