EnhancerDB
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  3. rs6540944[chr1:10740405]
Enhancers that have rs6540944[chr1:10740405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10726105 10750095 enh11495
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Liver Brain (SK-N-SH) Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs6540944[chr1:10740405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10740391 10740406 HNF4A JASPAR yes 26734771
chr1 10740392 10740406 RXRB JASPAR yes 26734772
chr1 10740392 10740407 HNF4G JASPAR yes 26734773
chr1 10740398 10740413 TFAP2A JASPAR yes 26734774
chr1 10740398 10740413 TFAP2C JASPAR yes 26734775
chr1 10740401 10740412 EBF1 JASPAR yes 26734776
chr1 10740401 10740413 TFAP2A JASPAR yes 26734777
chr1 10740403 10740412 TFAP2A JASPAR yes 26734778
Genes associated with rs6540944[chr1:10740405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More