EnhancerDB
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Enhancers that have rs6541355[chr1:95047844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95042223 95053775 enh12074
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs6541355[chr1:95047844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95047838 95047853 SOX21 JASPAR yes 30889593
chr1 95047843 95047853 GBX2 JASPAR yes 30889594
chr1 95047843 95047853 MNX1 JASPAR yes 30889595
chr1 95047843 95047853 RAX JASPAR yes 30889596
chr1 95047844 95047852 BARX1 JASPAR yes 30889597
chr1 95047844 95047852 BSX JASPAR yes 30889598
chr1 95047844 95047852 ISL2 JASPAR yes 30889599
chr1 95047844 95047852 LMX1B JASPAR yes 30889600
chr1 95047844 95047852 MSX1 JASPAR yes 30889601
chr1 95047844 95047852 MSX2 JASPAR yes 30889602
Genes associated with rs6541355[chr1:95047844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More