EnhancerDB
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  3. rs6580860[chr12:52561157]
Enhancers that have rs6580860[chr12:52561157]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52554925 52561655 enh14725
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6580860[chr12:52561157]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52561152 52562106 AR GTRD no Prostate (PC-3) 21546578
chr12 52561155 52561167 GLI2 JASPAR yes 120924624
chr12 52561155 52561167 ZBTB7B JASPAR yes 120924625
chr12 52561155 52561167 ZBTB7C JASPAR yes 120924626
Genes associated with rs6580860[chr12:52561157], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More