EnhancerDB
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Enhancers that have rs6580968[chr12:54261440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54259293 54267755 enh43744
Cervix (HeLa-S3) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6580968[chr12:54261440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54261175 54261535 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550124
chr12 54261209 54261779 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21550125
chr12 54261249 54263144 ZNF274 GTRD no Cervix (HeLa-S3) 21550126
chr12 54261256 54261758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550127
chr12 54261276 54261740 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550128
chr12 54261293 54261953 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550129
chr12 54261308 54261812 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550130
chr12 54261312 54261716 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550131
chr12 54261314 54261790 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550132
chr12 54261316 54261712 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550133
chr12 54261324 54261974 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550134
chr12 54261331 54261707 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550135
chr12 54261348 54261597 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550136
chr12 54261403 54261913 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550137
chr12 54261409 54261793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550138
chr12 54261418 54261988 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21550139
chr12 54261420 54261876 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550140
chr12 54261424 54261641 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21550141
chr12 54261428 54261772 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550142
chr12 54261438 54261446 FOXO3 JASPAR yes 121015501
Genes associated with rs6580968[chr12:54261440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More