EnhancerDB
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  3. rs6586536[chr1:17232280]
Enhancers that have rs6586536[chr1:17232280]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs6586536[chr1:17232280]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17230272 17232555 POLR2A UCSC Txn Factor no Conserved 107802244
chr1 17232278 17232293 TFAP2A JASPAR yes 27064240
chr1 17232278 17232293 TFAP2C JASPAR yes 27064241
chr1 17232280 17232295 TFAP2A JASPAR yes 27064242
chr1 17232280 17232295 TFAP2C JASPAR yes 27064243
Genes associated with rs6586536[chr1:17232280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More