EnhancerDB
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  3. rs6586552[chr1:17239865]
Enhancers that have rs6586552[chr1:17239865]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs6586552[chr1:17239865]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17238935 17240465 ZBTB33 GTRD no Lung (A549) 107802245
chr1 17239856 17239866 SP1 JASPAR yes 27065003
chr1 17239861 17239876 NR2C2 JASPAR yes 27065004
chr1 17239862 17239876 RXRG JASPAR yes 27065005
chr1 17239864 17239868 LFA1 TRANSFAC yes 27065006
Genes associated with rs6586552[chr1:17239865], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More