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- rs6588480[chr1:53978119]
Enhancers that have rs6588480[chr1:53978119]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
53975025 |
53980255 |
enh26705 |
|
|
Transcript factors that have rs6588480[chr1:53978119]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
53978107
|
53978121
|
POU1F1
|
JASPAR
|
yes
|
|
28935254
|
|
|
chr1
|
53978109
|
53978121
|
POU2F1
|
JASPAR
|
yes
|
|
28935255
|
|
|
chr1
|
53978110
|
53978119
|
POU3F4
|
JASPAR
|
yes
|
|
28935256
|
|
|
chr1
|
53978112
|
53978124
|
BHLHE23
|
JASPAR
|
yes
|
|
28935257
|
|
|
chr1
|
53978113
|
53978123
|
OLIG2
|
JASPAR
|
yes
|
|
28935258
|
|
|
chr1
|
53978113
|
53978123
|
OLIG3
|
JASPAR
|
yes
|
|
28935259
|
|
|
chr1
|
53978117
|
53978121
|
YY1
|
TRANSFAC
|
yes
|
|
28935260
|
|
Genes associated with rs6588480[chr1:53978119], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
53971910
|
54199877
|
-
|
GLIS1
|
ENSG00000174332.3
|
54199877
|
0
|
Uterus
|
0.078799
|
715
|
|