EnhancerDB
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  3. rs659843[chr1:43478030]
Enhancers that have rs659843[chr1:43478030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43453005 43490361 enh11805
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs659843[chr1:43478030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43478028 43478037 PITX3 JASPAR yes 28478050
chr1 43478028 43478038 GSC2 JASPAR yes 28478051
chr1 43478028 43478038 GSC JASPAR yes 28478052
chr1 43478029 43478037 OTX1 JASPAR yes 28478053
chr1 43478030 43478051 LUN1 TRANSFAC yes 28478054
Genes associated with rs659843[chr1:43478030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More