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- rs6598904[chr1:28109280]
Enhancers that have rs6598904[chr1:28109280]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
28102645 |
28115035 |
enh11672 |
|
|
Transcript factors that have rs6598904[chr1:28109280]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
28109266
|
28109285
|
CTCF
|
JASPAR
|
yes
|
|
27725884
|
|
|
chr1
|
28109272
|
28109293
|
ZNF263
|
JASPAR
|
yes
|
|
27725885
|
|
|
chr1
|
28109279
|
28109296
|
ESR1
|
JASPAR
|
yes
|
|
27725886
|
|
Genes associated with rs6598904[chr1:28109280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
28473677
|
28520447
|
-
|
PTAFR
|
ENSG00000169403.7
|
28520447
|
364397
|
Spleen
|
0.380269
|
405
|
|
|
chr1
|
28099694
|
28150963
|
+
|
STX12
|
ENSG00000117758.9
|
28099694
|
0
|
Lung
|
0.0611352
|
397
|
|