EnhancerDB
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  3. rs6600356[chr1:41374763]
Enhancers that have rs6600356[chr1:41374763]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41361200 41377195 enh11779
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs6600356[chr1:41374763]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41374757 41374773 POU4F2 JASPAR yes 28353611
chr1 41374757 41374773 POU4F3 JASPAR yes 28353612
chr1 41374759 41374773 POU4F1 JASPAR yes 28353613
chr1 41374759 41374774 HNF1A JASPAR yes 28353614
chr1 41374760 41374770 LHX6 JASPAR yes 28353615
chr1 41374760 41374770 MNX1 JASPAR yes 28353616
chr1 41374760 41374770 POU6F1 JASPAR yes 28353617
chr1 41374760 41374773 HNF1B JASPAR yes 28353618
chr1 41374761 41374769 LMX1A JASPAR yes 28353619
chr1 41374761 41374769 LMX1B JASPAR yes 28353620
chr1 41374761 41374769 NKX6-1 JASPAR yes 28353621
chr1 41374761 41374769 NKX6-2 JASPAR yes 28353622
chr1 41374761 41374769 VAX1 JASPAR yes 28353623
chr1 41374761 41374769 VAX2 JASPAR yes 28353624
chr1 41374761 41374769 VSX1 JASPAR yes 28353625
chr1 41374761 41374769 VSX2 JASPAR yes 28353626
Genes associated with rs6600356[chr1:41374763], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More