EnhancerDB
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  3. rs66490734[chr17:77897502]
Enhancers that have rs66490734[chr17:77897502]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs66490734[chr17:77897502]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77896741 77897502 TCF7L2 GTRD no Colon (HCT116) 21796687
chr17 77897103 77897971 TCF7L2 GTRD no Colon (HCT116) 21796688
chr17 77897495 77897506 FOSL2 JASPAR yes 56229460
chr17 77897497 77897510 SMAD2 JASPAR yes 56229461
chr17 77897500 77897510 TBR1 JASPAR yes 56229462
chr17 77897501 77897511 TBX21 JASPAR yes 56229463
chr17 77897502 77897510 MGA JASPAR yes 56229464
chr17 77897502 77897510 TBX15 JASPAR yes 56229465
chr17 77897502 77897510 TBX1 JASPAR yes 56229466
chr17 77897502 77897510 TBX4 JASPAR yes 56229467
chr17 77897502 77897510 TBX5 JASPAR yes 56229468
chr17 77897502 77897511 ZEB1 JASPAR yes 56229469
chr17 77897502 77897514 PKNOX1 JASPAR yes 56229470
chr17 77897502 77897514 PKNOX2 JASPAR yes 56229471
chr17 77897502 77897514 TGIF1 JASPAR yes 56229472
chr17 77897502 77897514 TGIF2 JASPAR yes 56229473
chr17 77897502 77897517 SCRT1 JASPAR yes 56229474
Genes associated with rs66490734[chr17:77897502], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More