EnhancerDB
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Enhancers that have rs66522313[chr1:54739471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54732705 54747095 enh11864
Bone Marrow (K562) Astrocyte Adrenal Pancreas Uterus Kidney Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs66522313[chr1:54739471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54739157 54739866 CTCF UCSC Txn Factor no Conserved 107804668
chr1 54739178 54739694 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107804669
chr1 54739186 54739716 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107804670
chr1 54739354 54739998 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804671
chr1 54739414 54739890 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107804672
chr1 54739424 54739794 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107804673
chr1 54739436 54739760 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804674
chr1 54739454 54739894 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804675
chr1 54739466 54739471 GATA2 JASPAR yes 28967323
chr1 54739466 54739902 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804676
chr1 54739467 54739827 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804677
chr1 54739469 54739813 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804678
chr1 54739471 54739871 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804679
Genes associated with rs66522313[chr1:54739471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More