EnhancerDB
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  3. rs66539840[chr1:41367588]
Enhancers that have rs66539840[chr1:41367588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41361200 41377195 enh11779
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs66539840[chr1:41367588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41367224 41367843 TCF7L2 GTRD no Colon (HCT116) 107802936
chr1 41367583 41367589 YY1 JASPAR yes 28352342
chr1 41367586 41367599 TFAP2A JASPAR yes 28352343
chr1 41367586 41367599 TFAP2B JASPAR yes 28352344
chr1 41367586 41367599 TFAP2C JASPAR yes 28352345
Genes associated with rs66539840[chr1:41367588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More