EnhancerDB
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  3. rs6661784[chr1:42080312]
Enhancers that have rs6661784[chr1:42080312]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs6661784[chr1:42080312]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42080300 42080315 MEF2C JASPAR yes 28401329
chr1 42080302 42080314 FOXC2 JASPAR yes 28401330
chr1 42080303 42080317 IRF7 JASPAR yes 28401331
chr1 42080306 42080327 IRF1 JASPAR yes 28401332
Genes associated with rs6661784[chr1:42080312], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More