EnhancerDB
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  3. rs6662600[chr1:172934817]
Enhancers that have rs6662600[chr1:172934817]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs6662600[chr1:172934817]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172932063 172935373 ZNF274 GTRD no Cervix (HeLa-S3) 21350742
chr1 172932290 172934863 ZNF274 GTRD no Cervix (HeLa-S3) 21350743
chr1 172932734 172934844 ZNF274 GTRD no Cervix (HeLa-S3) 21350746
chr1 172933567 172934941 ZNF274 GTRD no Cervix (HeLa-S3) 21350747
chr1 172933577 172934931 ZNF274 GTRD no Cervix (HeLa-S3) 21350748
chr1 172933577 172935239 TEF1 GTRD no Bone (Osteoblast) 21350749
chr1 172933580 172934839 ZNF274 GTRD no Cervix (HeLa-S3) 21350750
chr1 172933677 172935511 ZNF274 GTRD no Cervix (HeLa-S3) 21350756
chr1 172933679 172935225 ZNF274 GTRD no Cervix (HeLa-S3) 21350757
chr1 172933686 172935055 ZNF274 GTRD no Cervix (HeLa-S3) 21350759
chr1 172934813 172934817 H1TF2 TRANSFAC yes 33172414
chr1 172934813 172934817 NFE TRANSFAC yes 33172415
chr1 172934813 172934817 SRF TRANSFAC yes 33172416
Genes associated with rs6662600[chr1:172934817], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More