EnhancerDB
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  3. rs6664522[chr1:232726456]
Enhancers that have rs6664522[chr1:232726456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232723148 232738675 enh12785
Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Heart
Transcript factors that have rs6664522[chr1:232726456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232726167 232726462 STAT3 UCSC Txn Factor no Conserved 107879412
chr1 232726191 232726725 ZNF143 GTRD no Epithelial (MCF-7) 21392262
chr1 232726191 232726725 ZNF143 GTRD no Epithelial (MCF-7) 107879413
chr1 232726191 232726725 ZNF143 GTRD no Epithelial (MCF-7) 107879414
chr1 232726266 232726841 ZBTB33 GTRD no Brain (SK-N-SH) 107879415
chr1 232726266 232726841 ZBTB33 GTRD no Brain (SK-N-SH) 107879416
chr1 232726319 232726983 ZBTB33 GTRD no Brain (SK-N-SH) 107879417
chr1 232726319 232726983 ZBTB33 GTRD no Brain (SK-N-SH) 107879418
chr1 232726347 232726887 ZBTB33 GTRD no Brain (SK-N-SH) 107879419
chr1 232726347 232726887 ZBTB33 GTRD no Brain (SK-N-SH) 107879420
chr1 232726401 232726989 ZNF143 GTRD no Epithelial (MCF-7) 21392263
chr1 232726401 232726989 ZNF143 GTRD no Epithelial (MCF-7) 107879421
chr1 232726415 232726849 ZNF274 GTRD no Blood (GM12878) 21392264
chr1 232726415 232726849 ZNF274 GTRD no Blood (GM12878) 107879422
chr1 232726442 232726718 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21392265
chr1 232726442 232726718 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107879423
chr1 232726447 232726458 HOXA10 JASPAR yes 36174617
chr1 232726448 232726457 CDX1 JASPAR yes 36174618
chr1 232726448 232726458 HOXA13 JASPAR yes 36174619
chr1 232726448 232726458 HOXB13 JASPAR yes 36174620
chr1 232726448 232726458 HOXD13 JASPAR yes 36174621
chr1 232726450 232726465 FOXP1 JASPAR yes 36174622
chr1 232726451 232726472 IRF1 JASPAR yes 36174623
chr1 232726452 232726458 TBP TRANSFAC yes 36174624
chr1 232726452 232726463 FOXC1 JASPAR yes 36174625
chr1 232726452 232726464 FOXC2 JASPAR yes 36174626
chr1 232726453 232726464 FOXP2 JASPAR yes 36174627
Genes associated with rs6664522[chr1:232726456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More