EnhancerDB
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  3. rs6667709[chr1:42201943]
Enhancers that have rs6667709[chr1:42201943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42199705 42213143 enh290
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Thymus Stomach
Transcript factors that have rs6667709[chr1:42201943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42201935 42201949 ZIC1 JASPAR yes 28415377
chr1 42201935 42201950 ZIC3 JASPAR yes 28415378
chr1 42201935 42201950 ZIC4 JASPAR yes 28415379
Genes associated with rs6667709[chr1:42201943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More