EnhancerDB
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  3. rs6669246[chr1:204557561]
Enhancers that have rs6669246[chr1:204557561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204551125 204563635 enh889
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Blood (OCI-LY7) Stomach Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs6669246[chr1:204557561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204557258 204557595 ZNF143 GTRD no Epithelial (MCF-7) 21370790
chr1 204557556 204557566 EMX1 JASPAR yes 34713775
chr1 204557556 204557566 EN2 JASPAR yes 34713776
chr1 204557556 204557566 GBX1 JASPAR yes 34713777
chr1 204557556 204557566 GBX2 JASPAR yes 34713778
chr1 204557557 204557565 BARX1 JASPAR yes 34713779
chr1 204557557 204557565 EN1 JASPAR yes 34713780
chr1 204557557 204557565 ISL2 JASPAR yes 34713781
chr1 204557557 204557565 MSX1 JASPAR yes 34713782
chr1 204557557 204557565 MSX2 JASPAR yes 34713783
chr1 204557557 204557565 PDX1 JASPAR yes 34713784
Genes associated with rs6669246[chr1:204557561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More