EnhancerDB
  1. Home
  2. SNP
  3. rs6670394[chr1:17233668]
Enhancers that have rs6670394[chr1:17233668]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs6670394[chr1:17233668]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17233655 17233673 ESR2 JASPAR yes 27064440
chr1 17233655 17233675 PPARG JASPAR yes 27064441
chr1 17233666 17233680 GLIS2 JASPAR yes 27064442
chr1 17233666 17233680 GLIS3 JASPAR yes 27064443
Genes associated with rs6670394[chr1:17233668], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More