EnhancerDB
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  3. rs6677578[chr1:180534231]
Enhancers that have rs6677578[chr1:180534231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180527425 180535015 enh12425
Bone Marrow (K562) Skin (Keratinocyte) Cervix (HeLa-S3) Epithelial (MCF-7) Esophagus Astrocyte Placenta Heart
Transcript factors that have rs6677578[chr1:180534231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180533119 180534726 ZNF274 GTRD no Cervix (HeLa-S3) 21353661
chr1 180533372 180534272 ZNF274 GTRD no Bone Marrow (K562) 21353674
chr1 180533383 180535203 ZNF143 GTRD no Epithelial (MCF-7) 21353675
chr1 180534141 180534871 P63 GTRD no Skin (Keratinocyte) 21353701
chr1 180534224 180534233 THAP1 JASPAR yes 33526170
chr1 180534225 180534238 TFAP2A JASPAR yes 33526171
chr1 180534225 180534238 TFAP2B JASPAR yes 33526172
chr1 180534225 180534238 TFAP2C JASPAR yes 33526173
chr1 180534227 180534237 GABPA JASPAR yes 33526174
chr1 180534229 180534235 ETS1 JASPAR yes 33526175
chr1 180534229 180534235 SPI1 JASPAR yes 33526176
Genes associated with rs6677578[chr1:180534231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More