EnhancerDB
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  3. rs6678380[chr1:165812085]
Enhancers that have rs6678380[chr1:165812085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 165800587 165834795 enh699
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6678380[chr1:165812085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 165812078 165812089 FLI1 JASPAR yes 32802239
chr1 165812079 165812089 ERF JASPAR yes 32802240
chr1 165812079 165812089 ETS1 JASPAR yes 32802241
chr1 165812079 165812090 ETV2 JASPAR yes 32802242
chr1 165812079 165812092 ELF1 JASPAR yes 32802243
chr1 165812084 165812092 MEIS3 JASPAR yes 32802244
chr1 165812085 165812089 NFE TRANSFAC yes 32802245
Genes associated with rs6678380[chr1:165812085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More