EnhancerDB
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  3. rs6679555[chr1:241789880]
Enhancers that have rs6679555[chr1:241789880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 241786325 241797980 enh27672
Prostate (PC-3) Blood (T-cell) Astrocyte Blood (OCI-LY7) Lung (PC-9) Neural Stem Cells (H9) Thymus
Transcript factors that have rs6679555[chr1:241789880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 241789867 241789881 POU4F1 JASPAR yes 36619356
chr1 241789867 241789883 POU4F2 JASPAR yes 36619357
chr1 241789867 241789883 POU4F3 JASPAR yes 36619358
chr1 241789873 241789884 HOXA10 JASPAR yes 36619359
chr1 241789874 241789884 GBX2 JASPAR yes 36619360
chr1 241789874 241789884 MNX1 JASPAR yes 36619361
chr1 241789874 241789884 RAX JASPAR yes 36619362
chr1 241789875 241789883 BARX1 JASPAR yes 36619363
chr1 241789875 241789883 BSX JASPAR yes 36619364
chr1 241789875 241789883 ISL2 JASPAR yes 36619365
chr1 241789875 241789883 LMX1B JASPAR yes 36619366
chr1 241789875 241789883 MSX1 JASPAR yes 36619367
chr1 241789875 241789883 MSX2 JASPAR yes 36619368
Genes associated with rs6679555[chr1:241789880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More