EnhancerDB
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  3. rs66840727[chr1:17232467]
Enhancers that have rs66840727[chr1:17232467]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs66840727[chr1:17232467]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17230272 17232555 POLR2A UCSC Txn Factor no Conserved 107802244
chr1 17232461 17232471 MSC JASPAR yes 27064261
chr1 17232461 17232471 TFAP4 JASPAR yes 27064262
chr1 17232461 17232472 NRL JASPAR yes 27064263
chr1 17232464 17232479 MEF2C JASPAR yes 27064264
Genes associated with rs66840727[chr1:17232467], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More