EnhancerDB
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  3. rs6688733[chr1:116851484]
Enhancers that have rs6688733[chr1:116851484]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6688733[chr1:116851484]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116851463 116851484 IRF1 JASPAR yes 31792457
chr1 116851464 116851485 IRF1 JASPAR yes 31792458
chr1 116851465 116851485 RREB1 JASPAR yes 31792459
chr1 116851470 116851485 FOXP1 JASPAR yes 31792461
chr1 116851470 116851490 RREB1 JASPAR yes 31792462
chr1 116851470 116851491 IRF1 JASPAR yes 31792463
chr1 116851471 116851492 IRF1 JASPAR yes 31792464
chr1 116851476 116851497 IRF1 JASPAR yes 31792465
chr1 116851477 116851492 FOXP1 JASPAR yes 31792467
chr1 116851478 116851489 FOXP2 JASPAR yes 31792468
chr1 116851478 116851490 FOXC2 JASPAR yes 31792469
Genes associated with rs6688733[chr1:116851484], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More