EnhancerDB
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  3. rs6688929[chr1:172467354]
Enhancers that have rs6688929[chr1:172467354]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172464365 172471715 enh12373
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Esophagus Muscle (A673) Placenta Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs6688929[chr1:172467354]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172466165 172468151 ZBTB33 GTRD no Lung (A549) 107845747
chr1 172466181 172467397 ZBTB33 GTRD no Lung (A549) 107845748
chr1 172466216 172468309 TCF7L2 GTRD no Colon (HCT116) 107845749
chr1 172466217 172468169 ZBTB33 GTRD no Lung (A549) 107845750
chr1 172466221 172467466 ZNF274 GTRD no Bone Marrow (K562) 107845751
chr1 172466245 172467580 P63 GTRD no Skin (Keratinocyte) 107845753
chr1 172466310 172468298 TCF7L2 GTRD no Colon (HCT116) 107845756
chr1 172466416 172467402 ZBTB33 GTRD no Lung (A549) 107845763
chr1 172466454 172468088 ZBTB33 GTRD no Lung (A549) 107845764
chr1 172466910 172467613 ZNF274 GTRD no Cervix (HeLa-S3) 21350037
chr1 172466965 172467596 ZNF274 GTRD no Cervix (HeLa-S3) 21350038
chr1 172467023 172467484 ZNF143 GTRD no Epithelial (MCF-7) 21350039
chr1 172467103 172467562 ZNF274 GTRD no Cervix (HeLa-S3) 21350040
chr1 172467120 172467510 ZNF274 GTRD no Cervix (HeLa-S3) 21350041
chr1 172467143 172467379 SOX2 GTRD no Neural Stem Cells (H9) 21350042
chr1 172467344 172467358 POU1F1 JASPAR yes 33133622
chr1 172467345 172467357 POU3F2 JASPAR yes 33133623
Genes associated with rs6688929[chr1:172467354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More