EnhancerDB
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  3. rs6699252[chr1:42221302]
Enhancers that have rs6699252[chr1:42221302]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6699252[chr1:42221302]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42221284 42221304 RREB1 JASPAR yes 28418017
chr1 42221293 42221313 RREB1 JASPAR yes 28418018
chr1 42221296 42221305 SRY JASPAR yes 28418019
chr1 42221298 42221309 CDX2 JASPAR yes 28418020
chr1 42221298 42221312 FOXF2 JASPAR yes 28418021
chr1 42221298 42221313 FOXP1 JASPAR yes 28418022
chr1 42221299 42221310 FOXH1 JASPAR yes 28418023
chr1 42221299 42221315 SOX8 JASPAR yes 28418024
chr1 42221300 42221309 CDX1 JASPAR yes 28418025
chr1 42221300 42221310 HOXA13 JASPAR yes 28418026
chr1 42221300 42221312 FOXC2 JASPAR yes 28418027
chr1 42221301 42221312 FOXP2 JASPAR yes 28418028
chr1 42221301 42221313 FOXI1 JASPAR yes 28418029
Genes associated with rs6699252[chr1:42221302], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More