EnhancerDB
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  3. rs6701171[chr1:117017027]
Enhancers that have rs6701171[chr1:117017027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6701171[chr1:117017027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117016730 117017076 ZNF274 GTRD no Blood (GM12878) 21332820
chr1 117016895 117017449 ZNF274 GTRD no Blood (GM12878) 21332821
chr1 117016933 117017622 ZNF274 GTRD no Blood (GM12878) 21332822
chr1 117017027 117017043 RFX2 JASPAR yes 31810729
chr1 117017027 117017043 RFX3 JASPAR yes 31810730
chr1 117017027 117017043 RFX4 JASPAR yes 31810731
chr1 117017027 117017043 RFX5 JASPAR yes 31810732
chr1 117017027 117018033 ZNF274 GTRD no Blood (GM12878) 21332823
chr1 117017027 117018033 ZNF274 GTRD no Blood (GM12878) 107824253
Genes associated with rs6701171[chr1:117017027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More