EnhancerDB
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  3. rs6778429[chr3:189948491]
Enhancers that have rs6778429[chr3:189948491]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189945598 189959315 enh21217
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs6778429[chr3:189948491]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189948475 189948495 TP53 JASPAR yes 8634796
chr3 189948490 189948501 CDX2 JASPAR yes 8634797
chr3 189948491 189948502 HOXA10 JASPAR yes 8634798
chr3 189948491 189948502 HOXC11 JASPAR yes 8634799
chr3 189948491 189948502 HOXC12 JASPAR yes 8634800
chr3 189948491 189948502 HOXD12 JASPAR yes 8634801
Genes associated with rs6778429[chr3:189948491], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More