EnhancerDB
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  3. rs6788820[chr3:129099896]
Enhancers that have rs6788820[chr3:129099896]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 129095885 129119955 enh7528
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Colon (HCT116) Thyroid Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs6788820[chr3:129099896]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 129099893 129099902 SNAI2 JASPAR yes 5656190
chr3 129099893 129099903 TCF3 JASPAR yes 5656191
chr3 129099893 129099903 TCF4 JASPAR yes 5656192
chr3 129099895 129099904 ZEB1 JASPAR yes 5656193
chr3 129099896 129099904 TBX15 JASPAR yes 5656194
chr3 129099896 129099907 E2F6 JASPAR yes 5656195
Genes associated with rs6788820[chr3:129099896], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More