EnhancerDB
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  3. rs682542[chr1:201463981]
Enhancers that have rs682542[chr1:201463981]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201463125 201475335 enh12520
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs682542[chr1:201463981]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201460422 201464497 ZNF143 GTRD no Epithelial (MCF-7) 21364347
chr1 201460422 201464497 ZNF143 GTRD no Epithelial (MCF-7) 107856348
chr1 201462585 201464790 ZBTB33 GTRD no Lung (A549) 107856352
chr1 201462641 201464129 ZBTB33 GTRD no Brain (SK-N-SH) 107856356
chr1 201462906 201464337 ZNF143 GTRD no Epithelial (MCF-7) 21364356
chr1 201462906 201464337 ZNF143 GTRD no Epithelial (MCF-7) 107856374
chr1 201463402 201464184 TCF7L2 GTRD no Colon (HCT116) 107856379
chr1 201463972 201463982 BHLHE40 JASPAR yes 34498094
chr1 201463972 201463982 CLOCK JASPAR yes 34498095
chr1 201463972 201463982 HEY1 JASPAR yes 34498096
chr1 201463972 201463982 MAX JASPAR yes 34498097
chr1 201463972 201463982 MNT JASPAR yes 34498098
chr1 201463973 201463993 TP63 JASPAR yes 34498099
chr1 201463976 201463991 TP53 JASPAR yes 34498103
Genes associated with rs682542[chr1:201463981], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More