EnhancerDB
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  3. rs683052[chr1:23514953]
Enhancers that have rs683052[chr1:23514953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23509245 23517808 enh11607
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube)
Transcript factors that have rs683052[chr1:23514953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23514952 23514963 CDX2 JASPAR yes 27421183
chr1 23514953 23514964 HOXA10 JASPAR yes 27421184
chr1 23514953 23514964 HOXC11 JASPAR yes 27421185
chr1 23514953 23514964 HOXC12 JASPAR yes 27421186
chr1 23514953 23514964 HOXC13 JASPAR yes 27421187
chr1 23514953 23514964 HOXD12 JASPAR yes 27421188
Genes associated with rs683052[chr1:23514953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More