EnhancerDB
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  3. rs6873488[chr5:153597371]
Enhancers that have rs6873488[chr5:153597371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 153586145 153597465 enh38531
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Lung (PC-9)
Transcript factors that have rs6873488[chr5:153597371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 153597359 153597371 POU2F1 JASPAR yes 67017740
chr5 153597359 153597372 POU3F3 JASPAR yes 67017741
chr5 153597359 153597373 POU1F1 JASPAR yes 67017742
chr5 153597360 153597372 POU3F1 JASPAR yes 67017743
chr5 153597360 153597372 POU3F2 JASPAR yes 67017744
chr5 153597363 153597378 HNF1A JASPAR yes 67017747
chr5 153597364 153597376 MEF2A JASPAR yes 67017748
chr5 153597364 153597376 MEF2B JASPAR yes 67017749
chr5 153597364 153597377 HNF1B JASPAR yes 67017750
chr5 153597369 153597379 PAX3 JASPAR yes 67017751
chr5 153597371 153597381 EN2 JASPAR yes 67017752
chr5 153597371 153597381 ESX1 JASPAR yes 67017753
chr5 153597371 153597381 GBX1 JASPAR yes 67017754
chr5 153597371 153597381 GSX1 JASPAR yes 67017755
chr5 153597371 153597381 GSX2 JASPAR yes 67017756
chr5 153597371 153597381 LBX2 JASPAR yes 67017757
chr5 153597371 153597381 LHX2 JASPAR yes 67017758
chr5 153597371 153597381 RAX JASPAR yes 67017759
Genes associated with rs6873488[chr5:153597371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 153570290 153800544 + GALNT10 ENSG00000164574.11 153570290 0 Breast 0.0615183 5908