EnhancerDB
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  3. rs71052540[chr2:231542363]
Enhancers that have rs71052540[chr2:231542363]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 231540245 231567455 enh19309
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs71052540[chr2:231542363]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 231542345 231542366 IRF1 JASPAR yes 81670791
chr2 231542346 231542367 IRF1 JASPAR yes 81670793
chr2 231542347 231542368 IRF1 JASPAR yes 81670795
chr2 231542349 231542364 STAT2 JASPAR yes 81670796
chr2 231542350 231542364 STAT1 JASPAR yes 81670797
chr2 231542351 231542365 IRF7 JASPAR yes 81670798
chr2 231542351 231542372 IRF1 JASPAR yes 81670799
chr2 231542352 231542367 FOXP1 JASPAR yes 81670800
chr2 231542352 231542373 IRF1 JASPAR yes 81670801
chr2 231542353 231542368 PRDM1 JASPAR yes 81670802
chr2 231542353 231542374 IRF1 JASPAR yes 81670803
chr2 231542357 231542378 IRF1 JASPAR yes 81670804
chr2 231542358 231542373 FOXP1 JASPAR yes 81670805
chr2 231542360 231542375 FOXP1 JASPAR yes 81670806
chr2 231542362 231542377 FOXP1 JASPAR yes 81670807
chr2 231542363 231542378 FOXP1 JASPAR yes 81670808
Genes associated with rs71052540[chr2:231542363], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More