EnhancerDB
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  3. rs71278730[chr1:39580981]
Enhancers that have rs71278730[chr1:39580981]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39562325 39585995 enh11758
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Liver Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus
Transcript factors that have rs71278730[chr1:39580981]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39580974 39580986 TEF JASPAR yes 28253371
chr1 39580976 39580987 PHOX2A JASPAR yes 28253372
chr1 39580976 39580987 PROP1 JASPAR yes 28253373
chr1 39580978 39580989 CDX2 JASPAR yes 28253374
chr1 39580979 39580990 HOXA10 JASPAR yes 28253375
chr1 39580980 39580989 CDX1 JASPAR yes 28253376
Genes associated with rs71278730[chr1:39580981], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More