EnhancerDB
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  3. rs71366879[chr17:46552153]
Enhancers that have rs71366879[chr17:46552153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46526985 46553325 enh4455
Prostate (PC-3) Large Intestine Blood (T-cell) Astrocyte Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus
Transcript factors that have rs71366879[chr17:46552153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46552147 46552168 IRF1 JASPAR yes 54586929
chr17 46552151 46552166 FOXP1 JASPAR yes 54586930
chr17 46552152 46552167 FOXP1 JASPAR yes 54586931
chr17 46552153 46552168 FOXP1 JASPAR yes 54586932
Genes associated with rs71366879[chr17:46552153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More