EnhancerDB
  1. Home
  2. SNP
  3. rs71518458[chr1:42128171]
Enhancers that have rs71518458[chr1:42128171]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr1 42127851 42128791 vista1340
VISTA
Transcript factors that have rs71518458[chr1:42128171]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42127232 42128320 ZNF143 GTRD no Epithelial (MCF-7) 107802964
chr1 42128164 42128176 TFAP2A JASPAR yes 28406791
chr1 42128164 42128176 TFAP2A JASPAR yes 118279179
chr1 42128165 42128176 TFAP2A JASPAR yes 28406792
chr1 42128165 42128176 TFAP2A JASPAR yes 118279180
chr1 42128166 42128175 TFAP2A JASPAR yes 28406793
chr1 42128166 42128175 TFAP2A JASPAR yes 118279181
Genes associated with rs71518458[chr1:42128171], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More